gcell.cell.celltype.GETCellType.get_gene_jacobian

gcell.cell.celltype.GETCellType.get_gene_jacobian#

GETCellType.get_gene_jacobian(gene_name, multiply_input=True)[source]#

Get the jacobian of a gene. Each gene can have multiple TSSs, so this function returns a list of TSSJacobian objects. Each OneTSSJacobian contains a Peak x Motif jacobian score for a given TSS.

Parameters:
gene_name str

The name of the gene.

multiply_input bool (default: True)

If True, the input is multiplied. Defaults to True.

Return type:

list[OneTSSJacobian]

Returns:

list : OneTSSJacobian A list of TSSJacobian objects.