gcell.rna.gtf.GTF.get_exp_feather

gcell.rna.gtf.GTF.get_exp_feather#

GTF.get_exp_feather(peaks, extend_bp=300)[source]#

Get the expression data for the given peaks. Only for backwards compatibility.

Parameters:
peaks pd.DataFrame

The peaks to query.

extend_bp int, optional

The number of base pairs to extend the peaks, defaults to 300.

Return type:

DataFrame

Returns:

pd.DataFrame The expression data.